Chemical bonds are portrayed in textbooks as being nonpolar covalent, polar covalent, ionic, dative, donor-acceptor, coordination, and so on without giving clear reasons for ascribing whatever specific bond to that or another class []. A correct classification may, however, be important not only from the pedagogical point of view: from molecular mechanics (MM) experience we know that constructing a mechanistic description is not equally easily possible for different classes of compounds containing bonds of different types. For purely ''organic'' molecules with well defined bonds numerous empirical parameterizations have been developed quite successfully [,,]. Corresponding efforts when applied to metal containing compounds and hydrogen bonds until now did not give completely satisfactory result [,,]. Of course, a good number of works appeared which parameterize potential energy surfaces (PES) of some well defined classes of metal containing compounds, but some questions important also from the practical point of view remain unclear.
The problem addressed here concerns uniform description of the metal complexes with variable number of the ligands. Such a description becomes in demand in the molecular dynamics simulations (see e.g. MillotDehez) of metal ion behavior in solutions of complexing solvents containing also chelating ligands (e.g. crown-ethers, cyclic polyammines etc.). In such a system one may expect formation of numerous complexes with different number of solvent ligands and/or different mode (chelating number) of complexation which must be treated on equal footing in order to estimate their energies on a uniform scale. Clearly, the usual MM harmonic approximation for the metal-donor bond stretch energy accepted say in Ref. [] cannot account for such effects. Meanwhile, a simplistic replacement of a harmonic potential by another one with better asymptotic behavior (like the Morse potential) does not solve the problem since too many other factors seem to be important. These are the effective charge variation and nontrivial dependence of the interligand and metal-ligand interaction energy on metal ligand separations, to mention only a few.
The charge variability appears due to two types of interactions almost equally important in the case of metal ions binding by donor ligands: one is due to polarization of the ligands by the point metal ion and by the charges residing in other ligands as well; another is due to electron transfers from the donor atoms to the ions' empty shells (Lewis acid-base interactions). The importance of the former mechanism has been recently stressed in Ref. []. The same concept has been recently used while developing the COSMOS MM force field [] employed later for analysis of behavior of the Zn2+ complexes with nitrogen containing ligands Sternbergetal. The authors [] mentioned that the charge redistribution due to electron transfers is not important. This may be true for that class of objects the cited authors actually consider: the crown ether complexes of the Cs+ or Mg2+ ions, where the results of quantum chemical analysis reveal a negligibly weak transfer of electronic density from the oxygen donor atoms to the metal ions (though the calculated extent of this transfer is known to be ''method dependent''). Such a picture is not generally valid for all metals since some of them are much stronger Lewis acids than heavy alkali cations. For example, our older calculations on the charge distribution in the transition metal complexes revealed a general trend that the formally divalent transition metal cations bear an effective charge of about one unit charge, whereas for the trivalent cations the effective charge is less than two unit charges []. Even in less pronounced case of the Mg2+ ions coordinated through oxygens in xylose isomerase the effective charge obtained on Mg within the PM3 semiempirical calculation [] is close to unity. Similar picture has been reported in Ref. [] for Zn2+ complexes with imidazole. Remarkable role of the charge redistribution in close vicinity of the Ln3+ cations which does not reduce only to the polarization of the surrounding ligands has been reported by Malta et al. []. Thus the overall picture appears to be too confusing to hope that it can be disentangled by a combination of may be locally successful ad hoc recipes.
Previously we developed an approach which can be used to put the process of developing mechanistic descriptions of PES (i.e. of developing MM force fields) of different classes of compounds on a rational basis. It is the deductive molecular mechanics [,,] (DMM) which allows to develop a form of the MM force fields analyzing the form of the electronic wave function chosen in a form relevant to the physical picture of the considered class of molecules. In the present paper we apply the previously developed DMM approach to analytical derivation of the QM based form for the force fields involving the nontransition metal atoms. The DMM methodology which is a general framework for this description occupies a border position since it is designed to a bridge the gap between the QM and MM descriptions.
Deductive molecular mechanics (DMM) is an assembly of approximations DMM,SO4DMM,SP3CDMM performed in the general QM/MM context which when applied lead to a mechanistic description of PES for molecular systems. The mentioned QM method [,,] involves the usage of the trial wave function in the from of the antisymmetrized product of strictly local geminals (APSLG, see [] and references therein) with semiempirical Hamiltonians. The DMM methodology consists of constructing direct estimates for the electronic structure parameters (ESP) which are defined in the APSLG framework in terms of the parameters of the effective Hamiltonian. The ESPs thus estimated are then inserted in the APSLG based expression for the energy of a molecule at hand. This gives the required mechanistic description of the PES.
Below we briefly describe the QM-APSLG method for molecular electronic structure underlying the MM description of molecular PES and describe the physical prerequisites and procedures previously used [] to construct the mechanistic description of the molecular PES in organic molecules. Next we analyze the physical picture corresponding to the ''dative'' or ''ionic'' bonds between metal ions (modeled by their acceptor orbitals) and molecules containing nitrogen and oxygen donor atoms and construct an APSLG-based QM/MM model for description for the corresponding contributions to the PES.
In the semiempirical APSLG approximation the electronic wave function of the
molecule has the form (see Ref. [,,]) of the
antisymmetrized product of the two-electron functions (geminals):
| (1) |
| (2) |
| (3) |
| (4) |
The amplitudes (um,vm,wm) are determined by sequential diagonalizations
of 3×3 matrices of effective Hamiltonians formed separately for each
two-center bond (see below). Using the Hamiltonian of the MINDO/3 form
MINDO/3 with the APSLG trial wave function Eqs. (1), (2) in Ref. [] resulted in a semiempirical APSLG-MINDO/3 QM
method. The total energy then has a form closest to the standard MM energy
expression []:
| (5) |
| (6) |
| (7) |
The density matrix elements Eq. (6) comprise the subset of
the QM ESP's related to the geminal amplitudes. The diagonal geminal-related
ESP's define also the effective atomic charges:
| (8) |
The molecular integrals in Eq. (7) for the energy expression Eq. (5) are written in the basis of one-electron HOs given by the
formula (Ref. []):
| (9) |
| (10) |
|
| (11) |
The Jacobi angles at each atom together with the elements of the density matrices Eq. (6) comprise the set of the ESPs defined in the semiempirical APSLG framework. Both the amplitudes um,vm,wm for each bond (or an equivalent set of the geminal related density ESPs Eq.( 6)) and the Jacobi angles ([(w)\vec] b,[(w)\vec] l) for each heavy atom are determined variationally in Refs. [,,] by minimizing the energy Eq. (5).
The Jacobi angles themselves are not, however, visual enough for representing the systems of HOs at the heavy atoms of the molecule. For this reason in Refs. [,,] it was proposed to consider ''hybridization tetrahedra'' formed at each heavy atom by four corresponding vector parts [(v)\vec]m,m = 1¸4 of HO quaternions residing there. The orientation and the shape of these tetrahedra are uniquely related with the corresponding properties of the represented system of the HOs. The interhybrid angles qmm¢ (key invariants of the shape of the HOs' system) are given by:
| (12) |
| (13) |
| (14) |
The DMM is developed in [] terms of interactions between the hybridization tetrahedra which are considered as true building blocks of the mechanistic description for the molecular PES instead of commonly accepted ''balls and springs''. The tetrahedra interact according to formulae Eqs. (5)-(7) which depend both on molecular geometry and on shapes and mutual orientation of hybridization tetrahedra. The precise form of the DMM force fields depends on the approximations employed for the density matrix ESPs, which are accepted on a basis of analysis of the physical situation. For example, the DMM of ''organic'' molecules is derived in Ref. [] for the bond geminals close to the SCF closed shell two-electron function residing in the Arai subspace spanned by one-electron functions | tm ñ . In this case the density matrix ESPs can be naturally represented in the form:
| (15) |
The derivation of ''organic'' DMM was performed in Ref. [,] assuming that the single bond is close to the SCF two-electron function. This resulted in the approximation Eq. (15) for the density matrix elements. Validity of this picture can be illustrated by the date given in Table . However, the infinite bond-length asymptotic wave function of two electrons forming a single bond between two atoms is the Heitler-London singlet with two electrons with equal probability residing one by one on either end of this bond. This corresponds to the limit to which the covalent nonpolar bond flows when the interatomic distance increases (the homolytic cleavage of a s-bond). Dative bonds by contrast flow to the ionic limit Eq. (3) in the case of infinite bond elongation. This prevents from using the approximation Eq. (15) for the geminal ESPs since they correspond to the wave function with different asymptotic behavior. Our immediate purpose is to obtain estimates for the geminal ESPs in the ionic limit.
The geminal wave functions Eq. (2) in the APSLG approximation
are by definition obtained by diagonalizing the effective Hamiltonian for
the m-th bond:
| (16) |
| (17) |
|
| (18) |
The asymptotic ground state of Hmeff is controlled by relative position of the Hm0 nonzero diagonal elements on the energy scale. If b is the lowest diagonal matrix element of Hm0 the asymptotic ground state is the Heitler-London one (''organic'' case). An alternative situation takes place if the lowest diagonal matrix element of Hm0 equals (for the sake of definiteness) to a. This is possible if:
| (19) |
| (20) |
The previous application [,,] of the DMM approach was based on the fact that for the geminals having the Heitler-London wave function as their asymptotic limit the related ESPs can be taken as transferable quantities. For example, it was shown that the spin bond orders Pmrl in Eq. (6) can be set equal to 1/2 which is equivalent to the well known picture of the localized single bonds in organic molecules. For a considerable range of the bond-lengths around the equilibrium ones the above value of the spin bond-order remains invariant up to second order with respect to a small parameter and the interatomic distance dependence of the bond energy is dominated by that of the resonance (one-electron hopping) integrals between the left-end and right-end HOs ascribed to the bond under consideration. The deviations of the geminal-related ESPs from their invariant (transferable) values could be treated as a relatively small corrections. In the case of the ''dative'' bond the ionic configuration corresponding to accommodation of both bond electrons on (for the sake of definiteness) the right-end atom is the asymptotic wave function for the separated metal ion and the ligand molecule. This differs significantly from the ''organic'' situation so that the results of Refs. [,,] cannot be employed.
As we mentioned previously the density ESPs must be evaluated through the effective bond Hamiltonian Eq. (17). If this is done directly (without intermediate calculation of quantum amplitudes) corresponding quantities are the measurables in the quantum mechanics terms. In terms of the geminal amplitudes the ESPs are given by Eq. (6). To get the required direct estimates we turn to the projection operator technique. According to Refs. [,] whatever projection operator P can be obtained from the not too distant unperturbed operator P0 by the following formula:
| (21) |
| (22) |
| (23) |
| (24) |
Now we address the projection operator upon the ground state of a geminal. It is known in terms of the geminal amplitudes:
| (25) |
| (26) |
The Schrödinger equation in terms of the projection operator reads PupyshevStepanov:
| (27) |
| (28) |
| (29) |
In the weak bonding limit the ESP parameter y is one of higher order in the small parameter d than x. Identifying the matrix elements of the projection operators Eqs. (25), ( 26) establishes the relation between two parameterizations of the three-dimensional projection operators and produces explicit forms for the ESPs Eq. (6) in terms of x:
| (30) |
In the previous Subsection we obtained the picture of the geminal-related ESPs for the ''dative'' or ''donor-acceptor'' bond. This picture is different from the picture of ''polar covalent'' bond which may be characterized as an asymmetric one but nevertheless retaining the Heitler-London limit when b® 0. With use of the above results concerning the geminal related ESPs in the ionic limit we notice that the key estimate of the ''organic'' DMM becomes invalid: the geminal related ESPs even approximately are not the transferable quantities. By contrast, the values of all density matrix elements become at least linearly dependent on the resonance integral between the donor HO and the acceptor orbital. Together with the exponential distance dependence of the resonance integral this produces strong anharmonic potential characteristic for large interatomic separations.
The energy itself of the geminal in the ionic limit (ionic bond) can be easily estimated:
| (31) |
As it is seen from the perturbative estimates the density ESPs are not transferable and are rather sophisticated functions of other ESPs which define the shape and orientation of the hybridization tetrahedron on the donor atom. At this stage it is possible alternatively to trying to develop a mechanistic description to retain the variable x (and, may be, y) to reproduce details of the electronic structure. This is equivalent to using a QM description specifically for the dative bond. Incidentally this picture is an adequate form suitable for constructing a QM/MM junction. In mechanistic terms their meaning can be interpreted as a strongly anharmonic spring. This form must be used instead either of the energy of a covalent bond with constant (transferable) spin bond-orders characteristic for the usual covalent bonds or of the perturbative bond energy estimate. Though they are still rather sophisticated functions of the internuclear separation and of the shape and orientation of the hybridization tetrahedron residing on the donor atom they can be easily calculated since require only the elementary functions for their evaluation [] and have correct asymptotic behavior at infinite internuclear separation thus being potentially useful in the molecular dynamics modeling of complexes with variable number of coordination bonds between the metal atom and ligand donor atoms. This picture of the dative bonding is nevertheless a QM one though very much reduced.
We also notice that according to the perturbative estimates for the solutions of the system Eq. (28) the equilibrium value of the y variable is by one order of magnitude in bDA higher than x. Since only the combinations xy and y2 enter in the expression of the projection operator and thus in that for the energy we may set y = 0 without introducing too large error in energy and by this to further simplify the projection operator Eq. (26). With use of this approximation the bond energy becomes:
| (32) |
In the previous Section we presented a derivation of the DMM force fields related to the donor atom with lone pair interacting with metal ions. This derivation resulted in rather complicated formulae where all the terms depend on details of hybridization of the donor atom through the resonance integrals bDA. One may foresee two situations: (i) the shape of the hybridization tetrahedron is to major extent defined by the shape of the molecule itself; (ii) the shape of the hybridization tetrahedron is rather flexible and its variation in the course of formation of the dative bond is significant.
Indeed, when the dative bonds are formed by the sp3-nitrogen atoms the shape of their hybridization tetrahedra do not change. This can be understood on the basis of the linear dependency condition Eq. ( 14). Three covalent bonds fix the norm and the directions of three vector parts [(v)\vec]m of the four. Then the fourth is fixed by the cited linear condition. In this case the dependence of the dative bond energy on geometry parameters can be obtained, say, from analysis of that of the perturbative estimate Eq. (31). In the latter expression the molecular geometry dependence is dominated by the square of the resonance integral. Assuming as in the previous Section that the acceptor is represented only by its empty s-orbital we get as in the case of a hydrogen atom a significant simplification for the resonance integral of the dative bond:
| (33) |
|
In the previous Sections we applied the DMM methodology to derive formulae for the energy (force fields) for donor atoms interacting with complexing agents. A simplified representation for the acceptor with use of a single s-orbital was used. In this Section we consider the metal-ligand interactions from a slightly different point of view. The metal ion in a complex acquires some density not from one but from many lone pairs of the ligating donor atoms. Constructing of a mechanistic or at least an economic QM description for such a case would possibly help to rationale terms of interligand interaction force fields which are sometimes included in the standard MM picture to assure proper description of the metal complexes.
Metal ions (both with and without open d-shell) stay aside from the general MM picture based on the concept of localized transferable two-center bonds. The physical reasons are the specific properties of metal-ligand bonds such as lack of saturability, directionality (see[]), and transferability which are sufficient components of the standard MM picture. To be more precise the metal-ligand bonds lack directionality at metal center, though the directionality at donor atoms exists and the corresponding effects are termed as ''misdirect'' of lone pairs. These well known properties represent to our opinion the reasons why despite numerous attempts present in the literature (for review see e.g. Refs. Comba,Hay) the PES's of metal complexes are not easily covered by the MM-like schemes. In this context an attempt to deduce a QM/MM description for (nontransition) metal atoms using the general methodology (selecting the relevant form of the trial electronic wave function first, and extracting convenient ESPs to be used in the model energy expression) looks very much desirable. A necessity of namely QM/MM approach in this context is of course the flexibility of the corresponding ESPs which have to be recalculated for different molecular geometries in an economical way.
The physical concepts of the metal-ligand bonding mentioned above are largely negative statements. The metal-ligand bonds are nontransferable, nonlocalized, nondirectional at the metal site and directional on the ligand side. Thus the trial wave function for the metal complexes is generally not that of the APSLG form Eq. (1). On the other hand it is clear (and we used this assumption in previous Sections) that for the ligands themselves (''organic'' part) the APSLG form of the trial wave function is a relevant approximation. We performed comparative study of electronic structures of simple amines and ethers on one hand and their cyclic polycounterparts on another hand by the semiempirical APSLG-MNDO method. The calculation results are given in Table . One can see that the relevant parameters of electronic structure (the bond orders and electron densities and the weights of the s-functions in the lone pairs) are fairly transferable from the low-molecular amines and ethers to their cyclic polyanalogs. Our calculations on cyclic chelating ligands have been performed at more or less arbitrary conformation of the molecule at hand. One can see that the dispersion of the values of all ESPs related to donor atoms entering the cyclic chelating ligands is always smaller than the dispersion of the same values in a series of ethers or amines ranging from water or ammonia to the corresponding alkyl di- or trisubstitutes, respectively. Thus the APSLG form (together with its semiempirical implementation) seems to be a relevant approximation for treating free chelating agents like crown ethers or cyclic polyamines.
This brings us to the situation we are already familiar with: to that one which requires different methods of description to be applied to different parts of a molecule. We faced such a necessity while describing the properties of the d-shell in transition metal complexes [] and while developing a general theory of the QM/MM junctions Separation,PCCP. In both cases the solution have been reached by employing the McWeeny group function approximation [] in specific physical conditions. The general method consists in (i) selecting the relevant Arai subspaces [], (ii) ascribing an adequate number of electrons to each of them, and (iii) by selecting an appropriate approximation for the electronic wave function in each of these subspaces. The physically substantiated picture of the metal-ligand bonding can be formalized by assuming the following form of the trial electronic wave function:
| (34) |
Now let us address a possible approximation to be used for the FMLP function. Two groups of concepts can be attracted to do the necessary choice. In contrast with the directionality and saturability characteristic for ''organic'' covalent bonds the bonds formed by metal ions do not posses these properties. Thus there is no need to invoke the HO formation on the metal ion. Also we notice that in the infinite separation limit the FMLP wave function must flow to the antisymmetrized product of the lone pair geminals Eq. (3). The latter is in fact a single determinant function with all lone pair HOs doubly filled. Finally, we notice that important qualitative explanations concerning the structure of metal complexes have been given in Ref. [] with use of the self consistent field (SCF or single determinant) form of the electronic wave function in the Arai subspace spanned by the lone pair orbitals and metal s- and p-orbitals. With all these arguments we arrive to a conclusion that the single determinant (SCF) wave function is an appropriate form of the FMLP function.
To get an economical description of the ESPs relevant to the FMLP function we notice that the standard SCF wave function implies the MO expansion coefficients over the specified one-electron basis set to be the ESPs. This representation may be obtained by diagonalizing the matrix of the effective Fock operator (see below) in the specified Arai space. A more economical selection of the ESPs to be used in a QM/MM and eventually in a DMM-like description is possible. Indeed, the dimension of the Arai subspace we are interested in is NM+NLP, where NM is the number of valence orbitals on the metal ion and NLP is the number of lone pairs on the attached donor atoms. The number of the ESPs in the MO representation is (NM+NLP)2, which is the number of the MO expansion coefficients. These coefficients are subject to (NM+NLP)(NM+NLP+1)/2 orthonormalization conditions, but, first, these conditions are very difficult to explicitly use (may be by introducing (NM+NLP)(NM+NLP-1)/2 Jacobi angles), and, second, even thus reduced number of parameters is superfluous. The reason is that the single determinant wave function is determined up to the subspace of the filled orbitals. Whatever unitary transformations applied separately to the filled and the empty one-electron states does not change the wave function. Since the numbers of parameters necessary to describe these irrelevant transformations equal, respectively, to NM(NM-1)/2 and NLP(NLP-1)/2 the minimal number of parameters required to describe the single determinant function with NLP doubly filled and NM empty orbitals is only NMNLP. This reduction is possible with use of the method given by Eqs. (21) - (24). Taking the product of the lone pair geminals (the ionic asymptotic limit) as a zero approximation for the FMLP function we set the operator P0 projecting to the subspace lone pair HOs (dim\limfuncImP0 = NLP) as a starting point for constructing the parameterization of the subspace of the filled orbitals according to Eq. (21). The projection operator P Eq. (21) is in its turn the one-electron density entering the effective bond Hamiltonians Eq.(18) for the bonding geminals and the semiempirical APSLG energy expression Eq.(5). Matrices V are obviously an NLP×NM matrices. They contain the relevant ESPs for the FMLP function and ensure the correct asymptotic behavior: if a ligand goes to infinity the corresponding rows in the matrix V are set zero. One may check that in this case the corresponding off-diagonal matrix elements in the projection operator P remain zero and the diagonal ones remain unity as they were in the limiting projection operator P0.
Now let us turn to the contribution of the closest surrounding of the metal ion in the complex which consists of the metal centered AOs and the donor atoms' lone pair HOs to the energy. Notice first that the energy of the ''organic'' part of the complex is described by Eq. (5) with only variance that in the intraatomic intergeminal Coulomb terms (proportional to gtmtk¢) for the donor atoms whose lone pairs interact with the metal corresponding densities must be taken as diagonal matrix elements of the projection operator P instead of unity values characteristic for lone pairs in pure ''organic'' environment. The same values must be used in Eq. (8) for calculating the effective charges residing on the donor atoms.
The energy corresponding to the single determinant wave function with the occupied subspace \limfuncImP is given by []:
| (35) |
| (36) |
| (37) |
| (38) |
Now we address the average Coulomb interaction entering the energy expression. It has the standard SCF form for the metal orbitals:
| (39) |
| (40) |
| (41) |
| (42) |
Finally we address possible approximations to the energy of the metal ion with its closest surrounding on the basis of Eqs. (21), ( 35). Inserting these series in Eq. (35) and cutting the expansion at a particular overall order in V and V+ results in approximation to the energy as power series with respect to the set of the ESPs characteristic for the electron group of metal ion and its closest surrounding. The terms of odd overall order obviously correspond to the spin bond orders which appear between the lone pairs on the donor atoms and the metal ion. The necessity to take into account the variability of the metal-donor bond orders has been demonstrated recently in Ref. Sternbergetal in the context of an MM study. The terms of even overall order correspond to electron density transferred from the lone pairs to metal ion. While considering the dative bond from the point of view of a single donor atom we were restricting ourselves with the harmonic approximation relative to the corresponding parameter x appear only in the fourth order with respect to V. In the case of a metal complex it may be insufficient since the first terms responsible for the interactions between electrons transferred from the donor atoms to the metal. However, the Coulomb interactions between the donor atoms themselves vary already due to second order terms. The degree of this variation may be about a couple of electron volts by order of magnitude and should cause significant deviations from the points-on-a-sphere model and its modifications operating with constant interligand force fields.
In the previous Section the ESPs defined in the APSLG framework are determined by a variational procedure for the total energy Eq. (5). In the free ligand the shape and orientation of the system of HOs (hybridization tetrahedron) is determined by the geometry and interactions characteristic for the latter. It is only weakly perturbed by the resonance interaction with the empty (acceptor) orbitals. For the sake of simplicity modeling the acceptor was restricted by a single empty orbital of s-symmetry. This can be interpreted as a process of ''protonation'' or ''metallation'' of a donor atom. Forming additional (a superfluous from the point of view of usual valence) bond affects the shape of the hybridization tetrahedron. Considering the sp3-nitrogen atom [] reveals a correspondingly weak response of the nitrogen hybridization tetrahedron to the formation of an additional bond due to significant rigidity of the sp3-nitrogen hybridization tetrahedron. The formulae describing the reaction of the nitrogen hybridization tetrahedron are given in Ref. []. The case of doubly bonded oxygen donor atom remarkably differs from this simple picture. The covalent bonds formed by the oxygen atom fix only two of four HOs centered on it. Thus the linear dependency Eq.(14) does not suffice to fix the shape of the corresponding hybridization tetrahedron. To get around this uncertainty we consider here in detail the model ''water'' molecule i.e. of the oxygen atom with two hydrogen-like substituents which serve to represent usual covalent bonds. Then we consider what happens if an additional (dative) bonds are formed with an atom bearing single acceptor orbital of the s-character.
The properties of the oxygen atom with two covalent bonds in the APSLG picture are determined by the interplay two energy contributions: (i) the one-center energy of the atom and (ii) the resonance energy of two covalent bonds it forms. The hybridization/density dependent part of the one-center energy Eq. (5) reads:
| (43) |
| (44) |
Inserting Eq. (11) to the expression for the resonance energy we find that the minimum of the resonance part alone is reached when:
|
|
The form of the bonding HOs may be, nevertheless, specified on the basis of the orthonormality relations for the HOs which are consequences of the group SO(4) structure of the hybridization manifold. According to Eq. ( 12) the interhybrid angle for the bonding HOs is given by:
|
|
|
Now let us consider what happens when an additional ''dative'' bond is formed with an atom containing for the sake of simplicity only one empty s-orbital used for bonding. The linear response approximation previously constantly employed in the DMM framework cannot be employed in the present case since the matrix of the energy second derivatives with respect to variations d[(w)\vec] b and d[(w)\vec] l is degenerate (and thus cannot be inverted) due to above mentioned invariance of the energy with respect to the deformations of the oxygen hybridization tetrahedron between approximate sp2 and sp3 hybridization of the lone pairs. For that reason we try to extract the information on the shape of the oxygen hybridization tetrahedron with an extra dative bond from the structure of the SO(4) hybridization manifold. This is an analog for the degenerate perturbation theory for the energy considered as a function of the set of hybridization parameters [(w)\vec] b and [(w)\vec] l.
To start with it we assume that the HO with m = 1 will be used for the dative bond. For it we use the estimates Eq.(30) for the density ESPs. This may be termed as a ''harmonic'' approximation in terms of the x ESP. The energy of the dative bond is then given by
| (45) |
| (46) |
The formulae Eqs. (44) - (46) present together a specific QM/MM force fields for the dative bond formed by the doubly bonded oxygen atom. It is so since the cited equations represent the energy components in terms of the parameters of the semiempirical QM Hamiltonian and of the ESPs characterizing the covalent and dative bond on one hand and the shape and orientation of the hybridization tetrahedron residing on the oxygen atom on the other hand. On a recipe level the sum of Eqs. (45), (46) must be added to the total energy and the latter must be optimized also with respect to x and s1 as well as to all other ESPs at each value of the geometry parameters. A simplified treatment with somehow fixed values of dP and s is also possible. A remarkable feature of this approach is that it remains valid both at very large and shorter separations between the donor and acceptor atoms which allows to cover uniformly the regions normally treated by different methods: by QM at a shorter distances and by standard MM at longer ones.
Now we are equipped to study the shape of the hybridization tetrahedron on the oxygen donor atom. The structure of the SO(4) hybridization manifold does not pose enough restriction on its flexibility. We have to remind in this context that in the case of quadruply bonded carbon or triply bonded nitrogen atoms namely the structure of the hybridization manifold fixed the tetrahedral form of the model ''methane'' or ''ammonia'' molecules through the linear dependence relation Eq. (14). In the case of the doubly bonded oxygen the two defined vector parts ([(v)\vec]3 and [(v)\vec]4) do not suffice to determine the other two. We assume that the perturbation incurred by the dative bond formation does not decrease the overall s-weight (2s2) of the covalent bonding HOs since it would results in a too large energy increase of the ''water'' molecule. The energy of the latter is, however, independent on the actual value of s1 which controls the distribution of the s-weight between the lone pairs. The latter can access only a restricted range of values:
|
|
|
In order to numerically test the above evaluations we performed a series of APSLG-MNDO calculations on a simple model of a complex of Li+ with H2O where the cation has been represented by a single s-orbital with the standard MNDO parameterization for lithium. The calculation have been performed for the Li-O separation of 2.14 Å characteristic for Li+ complexes with ethers []. Results are presented in Table . In agreement with the above estimates we found first of all that the approximations of the ionic limit are valid for the ion-molecule interaction. In all cases the equilibrium value of x does not exceed 0.3 which can be shown to be a safe estimate for the validity of the ionic limit expansions. This ESP reaches its maximum for the "p"-coordination of the lithium ion to the water molecule. Nevertheless, the energy of this configuration is maximal. By contrast the minimal energy is reached for the planar configuration at the oxygen atom where the Li-O bond order is also minimal. This demonstrates the dominance of the electrostatic forces in shaping the molecular geometry of the model complexes. On the other hand the shape of the system of HO residing on the oxygen atom pretty much deviates from one expected on purely geometrical grounds. Almost true coincidence is observed for the "p"-coordination of the lithium ion. In this case the bonding HO is almost perpendicular to the water plane though the s-weight in it is not negligible: ca. 8%. At the same time in the configuration corresponding to the energy minimum the angle between the Li-O bond and the corresponding HO is also noticeable.
To conclude this Section we notice that the described discrepance between the molecular geometry at the oxygen donor atom and the shape of its hybridization tetrahedron is characteristic only for the ionic limit of the dative bond. If the additional bond reaches the covalent regime characteristic for example for real water protonation (formation of the H3O+ cation) there is no such uncertainty and as in the isoelectronic case of ammonia the pyramidal C3v geometry is with no doubt the equilibrium one and the misalignment between the bonds and HO does not exceed a couple of degrees [].
In the present paper we analyzed the behavior of the APSLG approximation at the frontier of its applicability area. Being originally designed for treating the systems with well defined localized two-center bonds it is employed here for analysis of dative (donor-acceptor) bonds and coordination compounds of metal ions. Two major results are acquired on this way. First, we developed a DMM description for the dative bonds formed by ether oxygen atom. It turned out that the DMM of the dative bonds differs from that of the usual covalent bonds in that respect that the ESPs corresponding to the bond orders are strongly distance dependent. Such a situation is described in the MM context (see e.g. Ref. []) by referring to the Pauling's bond-length-bond-order logarithmic relation []. Here we propose a sequential description for such a situation based on the standard QM technique. Also this treatment allowed to analyse the known flexibility of the coordination mode of the ether oxygen to acceptors and to rationale the observed dependence of the coordination trends on the charge of the metal cation. Second, we proposed to describe the metal ion and its closest surrounding with use of the McWeeny's parameterization for the occupied states projection operator in the space of one-electron functions spanned by the lone-pair HOs and the metal ion vacant valence orbitals. Within that sort of description one may analyze the sources and expected relative importance of different empirical force fields which appear in the The description in terms of the projection operator in the space of one-electronic states, of course, occupies a border position between the MM and QM ways of describing molecular structure.
One also has to notice that even in the ''organic'' MM realm the explicit reference to details of electronic structure (particularly when it concerns the redistribution of effective charges) is considered to be acceptable due to Gasteiger (see [] and reference therein). So the border between two types of description becomes more and more smeared with passage of time. On the other hand addressing the electronic structure in that or another way becomes even better substantiated when for the object at hand one may expect even much more significant charge redistribution characteristic for metal complexes. In any case the proposed treatment of the metal ion with its closest surrounding can be treated as an example of application of the general QM/MM methodology [,] to this specific problem.
The Schrödinger equation in terms of projection operator Eq. ( 27) gives a start for the perturbation expansion. Indeed, for the projection operator Eq.(26)
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The work is performed with partial financial support through the grant No 6-120 dispatched by the Young Researchers Commission of RAS. The author is thankful to Mr. A.M. Tokmachev and Mr. M.B. Darhovskii for their help in performing this work.
| Molecule | Electronic structure parameter | ||
| G | P | s12 | |
| NH3 | 0.270 | 0.532 | 0.657 |
| Me3N | 0.272 | 0.532 | 0.636 |
| Et3N | 0.274 | 0.531 | 0.637 |
| MeEtNH | 0.273 | 0.536 | 0.653 |
| 0.274 | 0.523 | ||
| 0.270 | 0.544 | ||
| (18)aneN6 | 0.272 | 0.515 | 0.645 |
| 0.271 | 0.523 | ||
| 0.273 | 0.538 | ||
| 0.273 | 0.504 | 0.683 | |
| 0.272 | 0.502 | ||
| 0.274 | 0.534 | ||
| 0.272 | 0.504 | 0.659 | |
| 0.273 | 0.503 | ||
| 0.271 | 0.554 | ||
| 0.272 | 0.523 | 0.645 | |
| 0.272 | 0.516 | ||
| 0.273 | 0.538 | ||
| 0.273 | 0.503 | 0.659 | |
| 0.272 | 0.504 | ||
| 0.271 | 0.554 | ||
| 0.273 | 0.503 | 0.682 | |
| 0.272 | 0.502 | ||
| 0.274 | 0.535 | ||
| G | P | s12 + s22 | |
| H2O | 0.263 | 0.579 | 0.789 |
| Me2O | 0.267 | 0.572 | 0.816 |
| Et2O | 0.268 | 0.573 | 0.807 |
| MeEtO | 0.267 | 0.573 | 0.815 |
| 0.268 | 0.571 | ||
| 18crown6 | 0.266 | 0.564 | 0.800 |
| 0.266 | 0.563 | ||
| 0.265 | 0.566 | 0.793 | |
| 0.266 | 0.565 | ||
| 0.265 | 0.563 | 0.803 | |
| 0.266 | 0.561 | ||
| 0.266 | 0.561 | 0.802 | |
| 0.266 | 0.562 | ||
| 0.266 | 0.565 | 0.793 | |
| 0.265 | 0.566 | ||
| 0.266 | 0.563 | 0.801 | |
| 0.266 | 0.564 | ||
| 15crown5 | 0.266 | 0.563 | 0.806 |
| 0.268 | 0.557 | 0.812 | |
| 0.267 | 0.560 | 0.811 | |
| 0.267 | 0.559 | 0.812 | |
| 0.267 | 0.561 | 0.812 |
| Angle (deg.) | Relative | x | HO angle (deg.) |
| Energy kcal/mol | with plane | ||
| 0 (planar) | 0.0 | 0.138 | 11.2 |
| 30 | 0.66 | 0.168 | 58.9 |
| 45 | 2.08 | 0.191 | 68.1 |
| 60 | 4.66 | 0.209 | 73.3 |
| 81 (tetrahedral) | 10.87 | 0.227 | 79.0 |
| 90 | 15.81 | 0.244 | 90.0 |